Guest author Stephen Fleming introduces CellBender, a software package for eliminating technical artifacts from high-throughput scRNA-seq and other multi-omics data.
This prostate cancer study used Terra to process exome sequencing and single-cell RNAseq data with automated workflows.
The Human Cell Atlas project makes its vast collection of data available through a Data Portal that offers direct export to a Terra workspace.
Dr. Kiran Garimella gives an overview of MAS-ISO-seq, a new method for generating a lot more data per run with long-read sequencing technologies such as PacBio, and shares a workspace that demonstrates the method’s data processing.
An overview of data and analysis resources provided by the BRAIN Initiative Cell Census Network (BICCN) via the Neuroscience Multi-omic Archive (NeMO) and Terra
Terra offers an assortment of cloud environments pre-configured for interactive analysis with popular tools and packages. In response to popular demand, we recently updated Terra’s R-based notebook environments to include the latest version of Seurat, a widely-used R package for multimodal single-cell analysis.
We teamed up with the BRAIN Initiative Cell Census Network consortium to put together a hands-on workshop focused on helping researchers get started with key resources including the Neuroscience Multi-Omic Archive, Single Cell Portal, and Terra.
In this guest blog post, Longqi Liu from Beijing Genomics Institute-Research and Miguel A. Esteban from the Guangzhou Institutes of Biomedicine and Health (Chinese Academy of Sciences), discuss their efforts in developing a better understanding of SARS-CoV-2 and how they utilized Single Cell Portal to make their research accessible to others. […]
In this post, Amanda Kedaigle, a computational scientist from the Stanley Center for Psychiatric Research is describing her experience with the Single-Cell Portal (SCP), a data visualization portal built on top of Terra. As a computational biologist, two words that are constantly used to describe my work are “collaborative” and “interdisciplinary” […]
Terra is developed by the Broad Institute of MIT and Harvard in collaboration with Microsoft and Verily.
