Computational biologist and GATK team member Megan Shand describes the new GATK pipeline for processing short-read WGS data produced by the Ultima Genomics technology.
Bioinformatics scientist Frank Ambrosio recounts how Terra has come to serve as a shared platform for public health labs, and to foster cross-cutting collaboration among members of the public health community
Introducing a new utility called Data Uploader and a great set of improvements to the data tables that make it easier to bring data into Terra and organize it.
This population genetics study used Terra to identify mitochondrial variants in 56K+ whole genomes from the gnomAD database using a scalable GATK workflow.
Are you interested in learning new bioinformatics skills and contributing to open source projects in an inclusive and collaborative environment?
End-to-end testing of tools and pipelines in practice and at scale; inspired by “Ten simple rules for large-scale data processing” (Fungtammasan 2022).
This prostate cancer study used Terra to process exome sequencing and single-cell RNAseq data with automated workflows.
The next generation of Terra’s workflow execution capabilities will provide support for a wider range of tools and workflow languages.
Kathleen Morrill of the Karlsson Lab gives us a pawtastic tour of canine science initiatives and lays out the ulti-mutt vision of a “dogs in the cloud” data ecosystem.
This cancer drug discovery study used Terra to process transcriptome profiling data with TOPMED RNA-Seq workflows.
Terra is developed by the Broad Institute of MIT and Harvard in collaboration with Microsoft and Verily.
